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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201797695_201798085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201797695 - 201798085

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

TTATAGTGAATA

Flanking Amino Acid:

GTGIGTGFGTALGAGQTSLF

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

74.8

0.56

0.7

69.5

24.5

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

47.8

-0.1

2.3

66.3

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042210

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069

ENSAPLT00000012679

201776207 - 201804275

28069