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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201801642_201803181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201801642 - 201803181

Intron Length:

1540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AAATCTGTAATT

Flanking Amino Acid:

YGQNKTAFGTSTTGFGTGTT

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

79.9

32.8

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

81.6

0.71

0.9

77.2

37.1

Minor 5ss

40.2

-1.1

2.8

54.6

37.1

Minor BPS

55.5

0.25

72.19

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042210

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069

ENSAPLT00000012679

201776207 - 201804275

28069