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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201803366_201803981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201803366 - 201803981

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTTTCCTTTACT

Flanking Amino Acid:

MKEYESKSLEELRLEDYQAN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

38.1

Major BPS

65.3

0.38

71.6

30.1

Major PPT

79.2

0.66

0.8

74.4

Minor 5ss

-1.7

2.7

41.8

44.6

Minor BPS

86.3

1.23

1.4

100.6

26.7

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012679

201776207 - 201804275

28069

ENSAPLT00000042210

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069