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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20182657_20183095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20182657 - 20183095

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTATCTGAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCTAT

U12 Branch Point Sequence:

TGTTCCCTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

73.9

42.7

Major BPS

56.2

0.15

1.3

54.7

42.5

Major PPT

61.7

0.26

57.9

37.2

Minor 5ss

31.5

-2.1

2.4

34.7

Minor BPS

64.1

0.52

85.92

39.8

Associated Gene:

Gene:

MLC1

Ensembl Gene ID:

ENSAPLG00000016154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034625

20165113 - 20183258

18146