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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201874805_201878156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201874805 - 201878156

Intron Length:

3352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TGTTTTCTACCC

Flanking Amino Acid:

DLWKAWKTSEVYNWTVDEVV

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

79.5

0.66

0.8

73.6

30.3

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

49.8

-0

1.9

67.01

38.8

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014268

201867542 - 201912034

44493

ENSAPLT00000035670

201859154 - 201913191

54038

ENSAPLT00000030614

201867584 - 201907526

39943

ENSAPLT00000048058

201867542 - 201913191

45650

ENSAPLT00000025643

201845766 - 201913191

67426

ENSAPLT00000041658

201867490 - 201913191

45702

ENSAPLT00000021480

201867584 - 201912191

44608

ENSAPLT00000039070

201867542 - 201913191

45650