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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201879645_201889694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201879645 - 201889694

Intron Length:

10050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

GCTTCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TGTCTCTGAATT

Flanking Amino Acid:

LDTVLFGPPLLTRHNHLKDF

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

69.8

0.49

37.5

Major PPT

83.8

0.76

0.8

80.8

31.2

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

64.9

0.55

1.4

79.05

36.7

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035670

201859154 - 201913191

54038

ENSAPLT00000014268

201867542 - 201912034

44493

ENSAPLT00000030614

201867584 - 201907526

39943

ENSAPLT00000048058

201867542 - 201913191

45650

ENSAPLT00000025643

201845766 - 201913191

67426

ENSAPLT00000041658

201867490 - 201913191

45702

ENSAPLT00000039070

201867542 - 201913191

45650

ENSAPLT00000021480

201867584 - 201912191

44608