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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201900008_201901849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201900008 - 201901849

Intron Length:

1842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTACGTAAA

5'SS Class:

major

3'SS Sequence:

TGGCCTTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAC

U12 Branch Point Sequence:

CCACCCCCGACT

Flanking Amino Acid:

EEIVSPMSIQYAAWLFGRRF

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

76.4

34.3

Major BPS

1.2

61.8

35.9

Major PPT

73.4

0.53

0.9

64.9

41.2

Minor 5ss

36.4

-1.5

46.1

42.6

Minor BPS

-0.3

1.9

58.72

44.1

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025643

201845766 - 201913191

67426

ENSAPLT00000048058

201867542 - 201913191

45650

ENSAPLT00000041658

201867490 - 201913191

45702

ENSAPLT00000035670

201859154 - 201913191

54038