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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201900008_201904825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201900008 - 201904825

Intron Length:

4818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTACGTAAA

5'SS Class:

major

3'SS Sequence:

TCTCTCGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

GCTGCCTTCAGC

Flanking Amino Acid:

EEIVSPMSIQSPALPSTVRQ

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

76.4

34.3

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

0.72

0.8

76.3

32.2

Minor 5ss

36.4

-1.5

46.1

42.6

Minor BPS

47.8

-0.1

2.2

58.37

46.7

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039070

201867542 - 201913191

45650

ENSAPLT00000030614

201867584 - 201907526

39943

ENSAPLT00000021480

201867584 - 201912191

44608

ENSAPLT00000014268

201867542 - 201912034

44493