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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201904893_201904998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201904893 - 201904998

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTAGA

5'SS Class:

major

3'SS Sequence:

CTCCTCTGGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCGAAT

U12 Branch Point Sequence:

CTCCTCTGGACA

Flanking Amino Acid:

VDPQHAHGSQSLSVPTFLAP

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

70.1

Major BPS

51.8

0.05

1.5

63.6

42.5

Major PPT

66.8

0.38

63.6

Minor 5ss

30.1

-2.3

2.7

34.4

41.1

Minor BPS

50.7

0.02

1.5

59.9

40.1

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030614

201867584 - 201907526

39943

ENSAPLT00000021480

201867584 - 201912191

44608