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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201904893_201911641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201904893 - 201911641

Intron Length:

6749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTAGA

5'SS Class:

major

3'SS Sequence:

TTTCAACCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CGCCTTTCAACC

Flanking Amino Acid:

VDPQHAHGSQRDLTRCDSES

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

70.1

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

72.7

0.51

0.9

63.2

38.2

Minor 5ss

30.1

-2.3

2.7

34.4

41.1

Minor BPS

47.9

-0.1

1.5

51.9

39.6

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035670

201859154 - 201913191

54038

ENSAPLT00000025643

201845766 - 201913191

67426

ENSAPLT00000041658

201867490 - 201913191

45702