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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201905217_201907183_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

201905217 - 201907183

Intron Length:

1967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATATTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTATACAACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGCTCTTAATT

Flanking Amino Acid:

LEFAVALRALVSEAFINIPP

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

73.8

37.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

68.1

0.41

1.1

61.1

43.9

Minor 5ss

54.1

0.14

2.5

66.4

45.1

Minor BPS

75.8

0.89

1.1

84.85

35.9

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030614

201867584 - 201907526

39943