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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201905217_201907618_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

201905217 - 201907618

Intron Length:

2402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATATTTT

5'SS Class:

weak_major

3'SS Sequence:

CAATTGGCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TCTTTTGCAATT

Flanking Amino Acid:

LEFAVALRALEDPVQIRDLT

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

73.8

37.5

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

66.8

0.38

62.1

43.9

Minor 5ss

54.1

0.14

2.5

66.4

45.1

Minor BPS

-0

2.1

70.72

41.5

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021480

201867584 - 201912191

44608