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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201907638_201911641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201907638 - 201911641

Intron Length:

4004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGCT

5'SS Class:

major

3'SS Sequence:

TTTCAACCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

CGCCTTTCAACC

Flanking Amino Acid:

GSQRGSGANKRLNSLRLRVL

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.3

72.5

37.3

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

72.7

0.51

0.9

63.2

38.2

Minor 5ss

28.5

-2.5

3.2

40.2

45.4

Minor BPS

47.9

-0.1

1.5

51.9

39.6

Associated Gene:

Gene:

STIM1

Ensembl Gene ID:

ENSAPLG00000013672

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021480

201867584 - 201912191

44608

ENSAPLT00000014268

201867542 - 201912034

44493