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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201918199_201918403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201918199 - 201918403

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TCCCGCTGACCC

Flanking Amino Acid:

THTSASEAFWKEQVLGVTHS

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

66.4

45.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

63.2

0.3

0.9

56.1

33.6

Minor 5ss

35.3

-1.7

2.9

41.6

38.9

Minor BPS

43.3

-0.5

2.1

52.11

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034819

201915448 - 201922192

6745

ENSAPLT00000015804

201915448 - 201919386

3939