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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201919023_201920173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201919023 - 201920173

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGCCCCTGACCC

Flanking Amino Acid:

FPYLCYRNGGGVFLIPYFIL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.54

0.8

65.3

36.2

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

-0

1.8

61.68

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034819

201915448 - 201922192

6745