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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_20198920_20200380_F

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
20198920 - 20200380
Intron Length:
1461

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGA|GTAAGCCCT
5'SS Class:
major
3'SS Sequence:
TAACTATTTCTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTAAT
U12 Branch Point Sequence:
AATTACATAACT
Flanking Amino Acid:
GESRSMIVWIENKGSVPQSL
Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
68.7
0.44
1.1
60
44.9
Major BPS
90.7
1.01
0.7
90
19.9
Major PPT
71.6
0.49
0.9
63
42.7
Minor 5ss
41.8
-0.9
3.1
54.6
43.2
Minor BPS
63.8
0.51
1.8
82.4
37.8

Associated Gene:

Gene:
MOV10L1
Ensembl Gene ID:
ENSAPLG00000002129
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002127
20195303 - 20223790
28488