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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202004385_202004870_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

202004385 - 202004870

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGATGT

5'SS Class:

major

3'SS Sequence:

GGACTGGGCCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TCGGCTTCCAAT

Flanking Amino Acid:

MGLLLVSDPLTFILTGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

62.3

39.2

Major BPS

71.8

0.54

1.2

32.5

Major PPT

49.6

-0

1.1

38.1

44.2

Minor 5ss

35.5

-1.6

3.2

43.9

44.5

Minor BPS

-0.5

2.1

56.49

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000807

202004362 - 202005798

1437