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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_20205474_20206068_F

Intron Information:

Intron Rank:
9
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
20205474 - 20206068
Intron Length:
595

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAGTAATT
5'SS Class:
major
3'SS Sequence:
TTTTTACAATTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAC
U12 Branch Point Sequence:
TTTTTTTTTACA
Flanking Amino Acid:
LEEGRPHLNTGDKVCLKSQV
Intron Amino Acid Position:
463

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.8
0.59
1.1
77.4
37.4
Major BPS
86.6
0.91
0.8
77.7
36.7
Major PPT
72.2
0.5
0.9
73
36.7
Minor 5ss
38.1
-1.3
3.4
57.7
46.5
Minor BPS
71.2
0.66
1.5
82.45
31.9

Associated Gene:

Gene:
MOV10L1
Ensembl Gene ID:
ENSAPLG00000002129
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002127
20195303 - 20223790
28488