Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_20206140_20206501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20206140 - 20206501

Intron Length:

362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAA

U12 Branch Point Sequence:

TTTCTTGCAACA

Flanking Amino Acid:

IIEYVAYITEIRNEEVTLKF

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

55.1

0.13

1.2

57.3

36.3

Major PPT

77.3

0.61

0.9

73.6

35.7

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

48.1

-0.1

2.1

68.33

38.3

Associated Gene:

Gene:

MOV10L1

Ensembl Gene ID:

ENSAPLG00000002129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002127

20195303 - 20223790

28488