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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_20206594_20207340_F

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
20206594 - 20207340
Intron Length:
747

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTATTTTAT
5'SS Class:
major
3'SS Sequence:
ATTCTAACAACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTAAC
U12 Branch Point Sequence:
ATTCTAACAACA
Flanking Amino Acid:
EPMDVEFVHCRITSRRCQLA
Intron Amino Acid Position:
517

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.6
0.7
1
78.6
31.1
Major BPS
84.6
0.86
0.8
83.9
22.3
Major PPT
66.8
0.38
1
60.8
38.7
Minor 5ss
48
-0.2
2.5
66.9
44.3
Minor BPS
45
-0.3
2
62.03
37.1

Associated Gene:

Gene:
MOV10L1
Ensembl Gene ID:
ENSAPLG00000002129
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002127
20195303 - 20223790
28488