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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202096310_202096797_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

202096310 - 202096797

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAAGAAA

5'SS Class:

major

3'SS Sequence:

CTGTGGAGATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CTGGCCTGAACG

Flanking Amino Acid:

RHETKTQMKIKAGQVLLVLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

64.5

39.8

Major BPS

59.9

0.25

1.3

70.1

Major PPT

43.2

-0.3

1.7

44.1

45.6

Minor 5ss

22.3

-3.2

3.9

30.1

37.2

Minor BPS

0.08

1.7

59.86

47.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003575

202096239 - 202101828

5590