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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_20215733_20217722_F

Intron Information:

Intron Rank:
19
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
20215733 - 20217722
Intron Length:
1990

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TTG|GTGAGTAAA
5'SS Class:
strong_major
3'SS Sequence:
TTGGTCTCTGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCGTAT
U12 Branch Point Sequence:
GTTTTGGTAACA
Flanking Amino Acid:
SASGSYNPLLITKLIKNYRS
Intron Amino Acid Position:
846

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.7
0.84
0.8
81.1
26.8
Major BPS
66.5
0.41
1.4
65.7
43.2
Major PPT
79.7
0.67
0.9
73.8
36.9
Minor 5ss
29.7
-2.3
2.6
30.1
36.9
Minor BPS
48.6
-0.1
2.6
71.26
41.2

Associated Gene:

Gene:
MOV10L1
Ensembl Gene ID:
ENSAPLG00000002129
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002127
20195303 - 20223790
28488