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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202187979_202188079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202187979 - 202188079

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTGCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCGCAC

U12 Branch Point Sequence:

GCACGCCCAGCT

Flanking Amino Acid:

VPVMGPALHKTSIEEMIAST

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

-0.5

1.4

42.8

41.8

Major PPT

68.9

0.43

0.9

61.7

34.9

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

35.7

-1

2.1

48.51

43.6

Associated Gene:

Gene:

FAM160A2

Ensembl Gene ID:

ENSAPLG00000006910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007174

202186456 - 202192297

5842

ENSAPLT00000047734

202186022 - 202189614

3593