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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202196453_202196533_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

202196453 - 202196533

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCT|GCAGGTGAG

5'SS Class:

weak_major

3'SS Sequence:

TGCTTGGGGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TTCTGCTCAGCA

Flanking Amino Acid:

RFELDIKGEAQRGWAPGARN

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.5

44.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

-0.1

1.3

44.1

45.9

Minor 5ss

23.2

-3.1

4.2

39.9

46.1

Minor BPS

48.8

-0

2.2

67.45

Associated Gene:

Gene:

CCKBR

Ensembl Gene ID:

ENSAPLG00000006606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006880

202192173 - 202197195

5023