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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202202374_202202655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202202374 - 202202655

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGGCGG

5'SS Class:

major

3'SS Sequence:

CCCTTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CAGTGCTGACCC

Flanking Amino Acid:

WLPPPALETLRAAGFYTVQV

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.1

42.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.65

0.7

72.8

25.4

Minor 5ss

23.8

-3

3.3

29.2

43.4

Minor BPS

-0.4

2.1

51.92

45.2

Associated Gene:

Gene:

SMPD1

Ensembl Gene ID:

ENSAPLG00000030260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046900

202189858 - 202204030

14173

ENSAPLT00000048212

202189858 - 202203879

14022