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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202202828_202202910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202202828 - 202202910

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCGGC

5'SS Class:

major

3'SS Sequence:

CTGCTGCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CCCCCACCAGCT

Flanking Amino Acid:

LEAAEQQGEKVHIIGHIPPA

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

58.1

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

63.3

0.3

0.9

54.4

36.6

Minor 5ss

29.8

-2.3

3.5

40.6

Minor BPS

35.9

-0.9

47.59

44.3

Associated Gene:

Gene:

SMPD1

Ensembl Gene ID:

ENSAPLG00000030260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048212

202189858 - 202203879

14022

ENSAPLT00000046900

202189858 - 202204030

14173