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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202202988_202203228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202202988 - 202203228

Intron Length:

241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCTG

5'SS Class:

major

3'SS Sequence:

GCCCCACGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CTGCGCTCACCC

Flanking Amino Acid:

WSWNYYRIVNRFEGTIAAQF

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.3

63.6

48.1

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

61.5

0.26

53.8

35.5

Minor 5ss

36.9

-1.5

3.1

47.7

47.8

Minor BPS

42.3

-0.6

2.1

51.55

45.5

Associated Gene:

Gene:

SMPD1

Ensembl Gene ID:

ENSAPLG00000030260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046900

202189858 - 202204030

14173

ENSAPLT00000048212

202189858 - 202203879

14022