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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202205984_202206519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202205984 - 202206519

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGCG

5'SS Class:

major

3'SS Sequence:

CCTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAG

U12 Branch Point Sequence:

GGTCCCTGAGCG

Flanking Amino Acid:

RVWGVGRDSGRDFAYVARDQ

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

38.5

Major BPS

-0.1

1.6

46.5

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

22.7

-3.1

3.4

28.9

43.8

Minor BPS

49.1

-0.2

1.8

56.22

44.1

Associated Gene:

Gene:

APBB1

Ensembl Gene ID:

ENSAPLG00000021238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027721

202204127 - 202211055

6929