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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202209696_202209821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202209696 - 202209821

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

TGGTCCTGCCCG

Flanking Amino Acid:

PGAVGASATAGPAMSGSLSK

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

32.3

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

70.1

0.45

0.9

61.1

40.1

Minor 5ss

24.1

-3

3.3

43.4

Minor BPS

-1.1

3.6

52.77

47.5

Associated Gene:

Gene:

APBB1

Ensembl Gene ID:

ENSAPLG00000021238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027721

202204127 - 202211055

6929