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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202214710_202214814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202214710 - 202214814

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGCCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACAGCAC

U12 Branch Point Sequence:

GGCCCCACAGCA

Flanking Amino Acid:

PGSAELYVIAGDRMRRVDLT

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

42.9

-0.4

1.3

45.4

37.1

Major PPT

60.2

0.23

1.1

53.5

41.6

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

41.3

-0.6

1.9

48.35

41.1

Associated Gene:

Gene:

HPX

Ensembl Gene ID:

ENSAPLG00000028385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022894

202213417 - 202218079

4663

ENSAPLT00000038762

202213417 - 202218079

4663

ENSAPLT00000025947

202213417 - 202218009

4593