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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202215384_202215689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202215384 - 202215689

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGGGT

5'SS Class:

major

3'SS Sequence:

ACGCATCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACGCAT

U12 Branch Point Sequence:

CGTGGCTGACGC

Flanking Amino Acid:

DDTGRIYAFRGGLMFRLDSW

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

65.6

Major BPS

47.8

-0.1

1.5

57.3

41.7

Major PPT

66.8

0.38

0.9

58.6

37.4

Minor 5ss

25.6

-2.8

3.5

34.5

43.8

Minor BPS

36.6

-1

2.2

43.01

44.4

Associated Gene:

Gene:

HPX

Ensembl Gene ID:

ENSAPLG00000028385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022894

202213417 - 202218079

4663

ENSAPLT00000025947

202213417 - 202218009

4593