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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202215798_202216109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202215798 - 202216109

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

CACTGCCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

ACTGCCCTACAG

Flanking Amino Acid:

RDYFIPCPGRGHGHGNASWG

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

-0.2

1.4

53.5

Major PPT

69.9

0.45

0.9

61.3

34.8

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

42.5

-0.7

2.1

47.42

45.4

Associated Gene:

Gene:

HPX

Ensembl Gene ID:

ENSAPLG00000028385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025947

202213417 - 202218009

4593

ENSAPLT00000022894

202213417 - 202218079

4663