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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202256646_202256839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202256646 - 202256839

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GGAGAACTAACG

Flanking Amino Acid:

KTGQCLQTLQGPSKHQSAVT

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

0.45

0.9

67.6

25.3

Major PPT

75.1

0.56

0.8

65.2

36.3

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

39.3

-0.9

41.42

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024890

202256377 - 202263013

6637

ENSAPLT00000009880

202256377 - 202265897

9521