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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202257051_202257454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202257051 - 202257454

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCGTGCTGACCA

Flanking Amino Acid:

GHTNRVYSLQFDGTHIVSGS

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

66.3

0.4

1.1

41.8

Major PPT

72.8

0.51

69.1

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

43.8

-0.4

2.1

51.23

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024890

202256377 - 202263013

6637

ENSAPLT00000009880

202256377 - 202265897

9521