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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202257681_202257960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202257681 - 202257960

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

CCTTGCTCACAG

Flanking Amino Acid:

TVRCMHLHGNRVVSGSRDAT

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.5

41.1

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

73.8

0.53

0.8

67.1

32.7

Minor 5ss

-1.5

3.6

55.4

48.8

Minor BPS

40.2

-0.8

2.2

44.15

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024890

202256377 - 202263013

6637

ENSAPLT00000009880

202256377 - 202265897

9521