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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202258143_202258654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202258143 - 202258654

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

TTTCCCAAAGCA

Flanking Amino Acid:

LKVWSAVTGECVQTLVGHTG

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

89.2

0.88

0.7

84.7

30.1

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

48.2

-0.1

2.1

70.13

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024890

202256377 - 202263013

6637

ENSAPLT00000009880

202256377 - 202265897

9521