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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202260834_202261319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202260834 - 202261319

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

TGTGACTGATGT

Flanking Amino Acid:

ELQDWLRTFQRWSGPEKLLA

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

40.2

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

74.7

0.56

0.8

72.1

32.5

Minor 5ss

38.3

-1.3

3.1

49.3

46.7

Minor BPS

42.6

-0.4

2.1

62.57

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024890

202256377 - 202263013

6637

ENSAPLT00000009880

202256377 - 202265897

9521