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Intron Name: Anas_platyrhynchos_platyrhynchos_1_202262792_202265726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

202262792 - 202265726

Intron Length:

2935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

GGGGCAGTGATT

Flanking Amino Acid:

QGDSKAPVPQAAAEEEDVSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

78.4

0.64

0.8

71.9

32.6

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

40.3

-0.6

2.2

53.15

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009880

202256377 - 202265897

9521