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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20291894_20291950_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20291894 - 20291950

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCAAAACGG

5'SS Class:

weak_major

3'SS Sequence:

GCTGCCGGCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

GCTGCCGGGGCC

Flanking Amino Acid:

RDWLTTPWALHPPNMYELHR

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.01

1.4

43.8

43.2

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

44.4

-0.3

1.7

45.7

41.4

Minor 5ss

22.6

-3.2

3.9

35.4

41.9

Minor BPS

-1.5

3.6

46.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019694

20287778 - 20295119

7342

ENSAPLT00000001576

20287778 - 20292552

4775