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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20318809_20320968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20318809 - 20320968

Intron Length:

2160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCCTTTTGACT

Flanking Amino Acid:

MQEEQQPEAAADPMSSSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.8

0.65

0.9

73.5

36.2

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

67.4

0.63

1.2

79.68

36.6

Associated Gene:

Gene:

TRABD

Ensembl Gene ID:

ENSAPLG00000002798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002846

20318746 - 20337489

18744