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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20350471_20351367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20350471 - 20351367

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CTGTCACTATCT

Flanking Amino Acid:

LKGAGLTPFSRQADGRKVLR

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.4

39.5

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

81.4

0.71

0.8

76.3

32.3

Minor 5ss

30.3

-2.3

3.3

39.1

46.1

Minor BPS

47.1

-0.1

2.2

69.78

46.6

Associated Gene:

Gene:

SELENOO

Ensembl Gene ID:

ENSAPLG00000003085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003155

20349617 - 20362014

12398