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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20356794_20357141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20356794 - 20357141

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGAA

5'SS Class:

major

3'SS Sequence:

TTCCCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

GTTCCATTACCC

Flanking Amino Acid:

SELLETMHLTGGDFTNIFYL

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

69.7

36.7

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

86.5

0.82

0.7

84.3

23.5

Minor 5ss

-2.6

3.1

31.6

42.8

Minor BPS

55.3

0.15

1.9

70.25

40.4

Associated Gene:

Gene:

SELENOO

Ensembl Gene ID:

ENSAPLG00000003085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003155

20349617 - 20362014

12398