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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20384369_20384600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20384369 - 20384600

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTGTTTTTATTT

Flanking Amino Acid:

KDVWFHLKRTALVSRTSNSV

Intron Amino Acid Position:

1578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.1

23.6

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

56.7

0.29

1.6

70.24

42.1

Associated Gene:

Gene:

TUBGCP6

Ensembl Gene ID:

ENSAPLG00000003180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003259

20381526 - 20403454

21929