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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20387921_20388171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20387921 - 20388171

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

ATTTTTGTATTT

Flanking Amino Acid:

PSPDSTQSVQAEEPEKAVPQ

Intron Amino Acid Position:

1303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

93.1

0.97

0.5

93.2

15.7

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

48.4

-0

2.1

72.97

39.1

Associated Gene:

Gene:

TUBGCP6

Ensembl Gene ID:

ENSAPLG00000003180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003259

20381526 - 20403454

21929