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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20390547_20391207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20390547 - 20391207

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

ALEEELEKKARQELIDHYSK

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.9

0.72

0.8

28.9

Minor 5ss

40.8

-1

3.2

56.1

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

TUBGCP6

Ensembl Gene ID:

ENSAPLG00000003180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003259

20381526 - 20403454

21929