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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20391750_20392419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20391750 - 20392419

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

RYSSISKEEKDLRMEIAKQE

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.8

0.83

0.7

85.8

28.4

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

TUBGCP6

Ensembl Gene ID:

ENSAPLG00000003180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003259

20381526 - 20403454

21929