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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20396878_20397963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20396878 - 20397963

Intron Length:

1086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCACAG

5'SS Class:

major

3'SS Sequence:

CTATTGATACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTTCTATTGATA

Flanking Amino Acid:

SSYNKGLVFQAFTSGLRKYL

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

53.4

45.5

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

63.3

0.3

56.3

43.1

Minor 5ss

35.5

-1.7

3.4

46.9

48.4

Minor BPS

58.7

0.27

1.6

72.51

32.6

Associated Gene:

Gene:

TUBGCP6

Ensembl Gene ID:

ENSAPLG00000003180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003259

20381526 - 20403454

21929