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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20398867_20400229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20398867 - 20400229

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTACGTGTC

5'SS Class:

major

3'SS Sequence:

TTTACTCTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTCATTTACT

Flanking Amino Acid:

SKRRCWERIGYPPGKKEEPY

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

66.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.7

0.6

72.8

37.4

Minor 5ss

-1.3

3.5

53.4

39.3

Minor BPS

66.5

0.6

1.9

86.74

38.3

Associated Gene:

Gene:

TUBGCP6

Ensembl Gene ID:

ENSAPLG00000003180

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003259

20381526 - 20403454

21929