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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20411628_20412259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20411628 - 20412259

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTCCT

5'SS Class:

major

3'SS Sequence:

ATTTATTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATTTATTTTACA

Flanking Amino Acid:

MDKNEVEALASDFYADLVKE

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.2

67.4

43.6

Major BPS

0.72

78.4

31.2

Major PPT

86.7

0.82

0.8

80.6

36.1

Minor 5ss

31.8

-2.1

42.9

Minor BPS

60.4

0.32

1.8

74.55

36.3

Associated Gene:

Gene:

HDAC10

Ensembl Gene ID:

ENSAPLG00000003588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003723

20404310 - 20422307

17998