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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20417108_20417762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20417108 - 20417762

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGAAGG

5'SS Class:

major

3'SS Sequence:

TTGTATCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTTTGTCAAGT

Flanking Amino Acid:

GTQYIFEEDPSVLYFSWHRY

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.2

60.2

44.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

84.1

0.77

0.8

81.5

35.9

Minor 5ss

35.3

-1.7

2.7

41.2

44.8

Minor BPS

49.3

0.02

2.4

79.4

Associated Gene:

Gene:

HDAC10

Ensembl Gene ID:

ENSAPLG00000003588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003723

20404310 - 20422307

17998